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Kategorie/Name/Versionbio/gffcompare/0.9.8
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conflict bio/gffcompare
LizenzArtistic License 2
URL https://github.com/gpertea/gffcompare
What-isbio/gffcompare/0.9.8 : GFFCOMPARE 0.9.8 provides classification and reference annotation mapping. (command 'gffcompare')
Hilfe-Text
GffCompare provides classification and reference annotation mapping and 
  matching statistics for RNA-Seq assemblies (transfrags) or other generic
  GFF/GTF files.
  GffCompare also clusters and tracks transcripts across multiple GFF/GTF
  files (samples), writing matching transcripts (identical intron chains)
  into <outprefix>.tracking, and a GTF file <outprefix>.combined.gtf which 
  contains a nonredundant set of transcripts across all input files (with
  a single representative transfrag chosen for each clique of matching 
  transfrags across samples).

DOCUMENTATION/FAQ
   Home         : 
   Manual/web   : 
   FAQ          : 
   Examples     : n./a.

The command line executable 'gffcompare' of this module can be found in the folder:
/opt/bwhpc/common/bio/gffcompare/0.9.8
The PATH is set to this folder, too.

Type 'gffcompare' without any options to see the command-line parameters.

In case of problems, please contact 'rainer.rutka@uni-konstanz.de'.
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Installationsdatum05.10.2017
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